How to cite the Bioconductor package lumi

lumi is a popular Bioconductor package that is available at https://bioconductor.org/packages/lumi. By citing R packages in your paper you lay the grounds for others to be able to reproduce your analysis and secondly you are acknowledging the time and work people have spent creating the package.

APA citation

Formatted according to the APA Publication Manual 7^th edition. Simply copy it to the References page as is.

APA

The minimal requirement is to cite the R package in text along with the version number. Additionally, you can include the reference list entry the authors of the lumi package have suggested.

Example of an in-text citation

Analysis of the data was done using the lumi package (v2.42.0; Du et al., 2008).

Reference list entry

Du, P., Kibbe, W.A., Lin, & S.M. (2008). lumi: a pipeline for processing Illumina microarray. In Bioinformatics. Oxford University Press.

Vancouver citation

Formatted according to Vancouver style. Simply copy it to the references section as is.

Vancouver

Example of an in-text citation

Analysis of the data was done using the lumi package v2.42.0 (1).

Reference list entry

1.
Du, P., Kibbe, W.A., Lin, S.M. lumi: a pipeline for processing Illumina microarray. Bioinformatics. Oxford, UK: Oxford University Press; 2008.

BibTeX

Reference entry in BibTeX format. Simply copy it to your favorite citation manager.

BibTeX

@MISC{Du2008-it,
  title     = "lumi: a pipeline for processing Illumina microarray",
  author    = "{Du} and {P.} and {Kibbe} and {W.A.} and {Lin} and {S.M.}",
  journal   = "Bioinformatics",
  publisher = "Oxford University Press",
  year      =  2008,
  address   = "Oxford, UK"
}

RIS

Reference entry in RIS format. Simply copy it to your favorite citation manager.

RIS

TY  - MISC
AU  - Du
AU  - P.
AU  - Kibbe
AU  - W.A.
AU  - Lin
AU  - S.M.
TI  - lumi: a pipeline for processing Illumina microarray
T2  - Bioinformatics
PY  - 2008
DA  - 2008
PB  - Oxford University Press
CY  - Oxford, UK
ER  -

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